Spitzer: APEX User List Multiframe Input Parameters

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APEX User List Multiframe Input Parameters

Parameter names in the command line version	Parameter names in the GUI version

Switch on/off (1/0) module	Module name in GUI

compute_uncertainties_internally	S/N estimator
have_uncertainties	N/A (assumed to be 1 if uncertainty images are given in Sigma List File)
run_fiducial_image_frame	Fiducial Image Frame
run_mosaic_interp	Mosaic Interpolate
run_mosaic_coadder	Mosaic Co Adder
run_detect_medfilter	Detect Med Filter
run_gaussnoise	Gauss Noise
run_mosaic_combiner	Mosaic Combiner
run_extract_medfilter	Extract Med Filter
run_detectionmap	Detection Map
run_sourcestimate	Source Estimate
run_aperture	Aperture Photometry
run_select	Select

	Initial Setup
IMAGE_STACK_FILE_NAME	Image Stack File
OUTPUT_DIR	Output Directory
verbose	N/A**
	Optional Input & Mask Files (within Initial Setup)
SIGMALIST_FILE_NAME	Sigma List File
DCE_STATUS_MASK_LIST	DCE Status Mask List
DCE_Status_Mask_Fatal_BitPattern	Fatal Mask Bit Pattern
RMASK_LIST	Rmask List File
RMask_Fatal_BitPattern	Fatal Mask Bit Pattern
PMASK_FILE_NAME	Pmask FITS File
PMask_Fatal_BitPattern	Fatal Mask Bit Pattern
FIF_FILE_NAME	FIF file

	APEX User List multiframe Settings
INPUT_USER_LIST	User Input Fixed Positions Table File Name
use_input_list_type	Use Input List Type
N/A (MOSAIC_PIXEL_RATIO overrides MOSAIC_PIXEL_SIZE)	Pixel by Size
N/A (MOSAIC_PIXEL_RATIO overrides MOSAIC_PIXEL_SIZE)	Pixel by Ratio
MOSAIC_PIXEL_SIZE_X	Pixel Size X (deg)
MOSAIC_PIXEL_SIZE_Y	Pixel Size Y (deg)
MOSAIC_PIXEL_RATIO_X	Pixel Ratio X
MOSAIC_PIXEL_RATIO_Y	Pixel Ratio Y
N/A (either set PRF_FILE_NAME or PRF_MAP_FILE_NAME)	Use PRF File Name
N/A (either set PRF_FILE_NAME or PRF_MAP_FILE_NAME)	Use PRF Map File Name
PRF_file_name	PRF File Name
PRFMAP_FILE_NAME	PRF Map File Name
Mosaic_PRF_file_name	Mosaic PRF File Name
PROBABILITY_THRESHOLD	Probability Threshold
delete_intermediate_files	Delete Intermediate Files
use_background_subtracted_image_for_fitting	Use Background Subtracted Image for Fitting
use_background_subtracted_image_for_aperture	Use Background Subtracted Image for Aperture
use_data_unc_for_fitted_SNR	Use Data Uncertainties for PRF-fitted SNR
create_std_mosaic	Create Standard Deviation Mosaic
create_unc_mosaic	Create UNC Mosaic
sigma_weighted_coadd	Sigma Weighted Coadd
use_refined_pointing	Use Refined Pointing

SNESTIMATORIN	S/N estimator
Gain	Gain in e-/image unit
Read_Noise	Read Noise in e-
Confusion_Sigma	Confusion Sigma in e-
SIGMA_DIR***	S/N estimator output subdirectory

FIDUCIALIMAGEFRAMEIN	Fiducial Image Frame
Edge_Padding	Edge Padding
Projection_Type	Projection
Coordinate_System	Coordinate System
CROTA2 (= A)	Use average input orientation
CROTA2	CROTA2

MOSAICINTIN	Mosaic Interpolate
INTERP_METHOD	Interpret Method
FINERES	Fine Res
DRIZ_FAC	Drizzle Factor
GRID_RATIO	Grid Ratio
ALPHA	Alpha
INTERP_DIR***	Mosaic Interpolate output subdirectory

MOSAICCOADDIN	Mosaic CoAdder
TILEMAX_X	Tile Max X
TILEMAX_Y	Tile Max Y
INT_TIME_KWD	Fits Integration Time Keyword
USE_INT_TIME_KWD	Integration Time Weighted Coadd
COADDER_DIR***	Mosaic Co-Adder output subdirectory

DETECT_MEDFILTER	Detect Med Filter
Window_X	Window X
Window_Y	Window Y
N_Outliers_Per_Window	Outlier / Window
Min_Good_Pixels_In_Window	Min Good Pixels In Window
Min_GoodNeighbors_Number	Min Good Neighbors Number
Sbkg_Filt_Size_for_Med	SExtractor background filter size
Use_Sbkg_for_Med	Use SExtractor background estimation
Max_Bad_Pixels_OutputImage	N/A**
MEDFILTER_DIR***	Med Filter output subdirectory

GAUSSNOISE	Gauss Noise
Window_X	Window X
Window_Y	Window Y
N_Outliers_Per_Window	Number of Outliers per Window
Min_Good_Pixels_In_Window	Min Good Pixels Per Window
Min_GoodNeighbors_Number	Min Good Neighbors Number
Max_BadPixels_OutputImage	N/A**

APEXMOSAICCOMBINER	Mosaic Combiner
COMBINER_DIR***	Mosaic Combiner output subdirectory

EXTRACT_MEDFILTER	Extract Med Filter
Window_X	Window X
Window_Y	Window Y
N_Outliers_Per_Window	Outliers / Window
Min_Good_Pixels_In_Window	Min Good Pixels In Window
Min_GoodNeighbors_Number	Min Good Neighbors Number
Sbkg_Filt_Size_for_Med	SExtractor background filter size
Use_Sbkg_for_Med	Use SExtractor background estimation
Max_BadPixels_OutputImage	N/A**

DETECTIONMAP	Detection Map
N_Edge	N Edge

SOURCESTIMATE	Source Estimate
InputType	Input Type
Fitting_Area_X	Fitting Area X
Fitting_Area_Y	Fitting Area Y
Max_Number_PS	Max Number ps
Chi_Threshold	Chi Threshold
N_Edge	N Edge
Max_N_Iteration	Max N Iteration
Max_N_Success_Iteration	max N Success Iteration
MinimizeFtol	Minimize Ftol
MinimizeFtolSuccess	Minimize Fto Success
DitherPixelFraction	Dither Pixel Fraction
DitherFluxFraction	Dither Flux Fraction
DeblendDitherPixelFraction	DeblendDitherPixelFraction
Background_Fit	Background_Fit
Random_Fit	Random_Fit
Chi2_Improvement	Chi2_Improvement
PRF_ResampleX_Factor	PRF ResampleX Factor
PRF_ResampleY_Factor	PRF ResampleY Factor
Normalization_Radius	Normalization_Radius
Use_Photerr_for_SNR	Use Photerr for SNR
Gain_for_SNR	Gain for SNR (e-/data)

APERTURE	Aperture Photoemetry
N_Apertures	Number of Apertures
Aperture_Radius_1	Aperture Radius 1
Aperture_Radius_2	Aperture Radius 2
Aperture_Radius_3	Aperture Radius 3
Aperture_Radius_4	Aperture Radius 4
Aperture_Radius_5	Aperture Radius 5
Min_Number_Pixels	Min Number Pixels
Annulus_Compute_Type	Annulus Compute Type
Inner_Radius	Inner Radius
Outer_Radius	Outer Radius
Use_Annulus	Use Annulus

SELECT	Select
select_columns = "srcid, detid, etc"	Columns selection
select_conditions = "SNR > 6.0 and dblend ! NO etc"	Condition Builder

Note -- (1) All bold-faced names are the modules or the names of parameter blocks in the GUI flow.

Note -- (2) N/A means that these parameters are available on the command line, but are not available from within the GUI, or are set in a different way.

Note -- (3) N/A** means that the parameter is set implicitly in the GUI flow.

*** -- set this parameter near the top of the namelist, not in the parameter block for the module.